Detection and validation of QTLs for flowering time in morning glory
デジタルデータあり（科学技術振興機構）
すぐに読む
J-STAGE
全国の図書館の所蔵
国立国会図書館サーチが連携している各図書館等から取得した所蔵情報を表示します。
所蔵館、利用可否等の詳細・最新状況は情報提供元の各館のサイト・データベースで直接ご確認ください。所蔵館から取寄せることが可能かなど、資料の利用方法は、ご自身が利用されるお近くの図書館へご相談ください。詳細は ヘルプ をご覧ください。
その他
J-STAGE
デジタルCiNii Research
検索サービスデジタル遷移先のサイトで、CiNii Researchが連携している機関・データベースの所蔵状況を確認できます。
書誌情報
この資料の詳細や典拠（同じ主題の資料を指すキーワード、著者名）等を確認できます。
- 資料種別
- 記事
- 著者・編者
- Hiroaki KatsuyamaTakuro ItoKyousuke EzuraEmdadul HaqueAtsushi HoshinoEiji NitasakaMichiyuki OnoShusei SatoSachiko IsobeHiroyuki FukuokaNobuyoshi WatanabeTsutomu Kuboyama
- 著者標目
- タイトル（掲載誌）
- Breeding science
- 巻号年月日等（掲載誌）
- 75(5):2025.12
- 掲載巻
- 75
- 掲載号
- 5
- 掲載ページ
- 339-348
- 掲載年月日（W3CDTF）
- 2025-12
- ISSN（掲載誌）
- 1344-7610
- ISSN-L（掲載誌）
- 1344-7610
- 出版事項（掲載誌）
- Kyoto : Japanese Society of Breeding
- 出版地（国名コード）
- JP
- 本文の言語コード
- eng
- NDLC
- 対象利用者
- 一般
- 所蔵機関
- 国立国会図書館
- 請求記号
- Z54-J372
- 連携機関・データベース
- 国立国会図書館 : 国立国会図書館雑誌記事索引
- 書誌ID（NDLBibID）
- 034474421
- 整理区分コード
- 632
- 要約等
- <p>Japanese morning glory (<i>Ipomoea nil</i>), a short day plant, has been used for studying flowering times. Here, quantitative trait loci (QTL) analysis for days from sowing to flowering (DTF) of F<sub>2</sub> between <i>I. nil</i> var. Tokyo Kokei Standard (TKS) and <i>I. hederacea</i> line var. Q65, an early flowering variety, revealed seven QTLs: <i>QTL Ipomoea Flowering 1–7</i> (<i>qIF1–7</i>). The position of <i>qIF3</i>, which had the most significant effect among the seven QTLs, corresponds with that of <i>I. nil</i> (or <i>I.</i> <i>hederacea</i>) <i>CONSTANS</i> (<i>InCO/IhCO</i>) in the linkage map. There is a single-base InDel in the coding sequence of <i>InCO/IhCO</i>. The single-base deletion (SBD) causes a frame-shift mutation and loss of function in TKS allele (<i>inco-1</i>). <i>I. nil</i> accessions bearing <i>inco-1</i> tend to flower early, similarly to rice varieties bearing the loss of function allele of <i>CO</i> ortholog, <i>hd1</i>. The TKS allele of <i>qIF3</i> reduces DTF and corresponds with the inferred effect of <i>inco-1</i>. Based on the distribution of <i>inco-1</i>, a hypothesis was proposed that the SBD in <i>inco-1</i> might have played an important role in the expansion of Japanese morning glories, originally native to the tropical regions of the Americas, into temperate Asia.</p>
- DOI
- 10.1270/jsbbs.24067
- オンライン閲覧公開範囲
- インターネット公開
- 連携機関・データベース
- 科学技術振興機構 : J-STAGE
- 要約等
- <p>Japanese morning glory (<i>Ipomoea nil</i>), a short day plant, has been used for studying flowering times. Here, quantitative trait loci (QTL) analysis for days from sowing to flowering (DTF) of F<sub>2</sub> between <i>I. nil</i> var. Tokyo Kokei Standard (TKS) and <i>I. hederacea</i> line var. Q65, an early flowering variety, revealed seven QTLs: <i>QTL Ipomoea Flowering 1–7</i> (<i>qIF1–7</i>). The position of <i>qIF3</i>, which had the most significant effect among the seven QTLs, corresponds with that of <i>I. nil</i> (or <i>I.</i> <i>hederacea</i>) <i>CONSTANS</i> (<i>InCO/IhCO</i>) in the linkage map. There is a single-base InDel in the coding sequence of <i>InCO/IhCO</i>. The single-base deletion (SBD) causes a frame-shift mutation and loss of function in TKS allele (<i>inco-1</i>). <i>I. nil</i> accessions bearing <i>inco-1</i> tend to flower early, similarly to rice varieties bearing the loss of function allele of <i>CO</i> ortholog, <i>hd1</i>. The TKS allele of <i>qIF3</i> reduces DTF and corresponds with the inferred effect of <i>inco-1</i>. Based on the distribution of <i>inco-1</i>, a hypothesis was proposed that the SBD in <i>inco-1</i> might have played an important role in the expansion of Japanese morning glories, originally native to the tropical regions of the Americas, into temperate Asia.</p>
- DOI
- 10.1270/jsbbs.24067
- 関連情報（URI）
- 参照
- Genome sequence and analysis of the Japanese morning glory Ipomoea nilComprehensive Structural Analysis of the Genome of Red Clover (Trifolium pratense L.)High-Throughput SNP Genotyping by Single-Tube PCR with T <sub>m</sub> -Shift PrimersStress-induced flowering: the third category of flowering responseNatural variation and artificial selection of photoperiodic flowering genes and their applications in crop adaptationHighly accurate protein structure prediction with AlphaFoldMapping short DNA sequencing reads and calling variants using mapping quality scoresUncovering of major genetic factors generating naturally occurring variation in heading date among Asian rice cultivars<i>Hd1</i>, a Major Photoperiod Sensitivity Quantitative Trait Locus in Rice, Is Closely Related to the Arabidopsis Flowering Time Gene <i>CONSTANS</i>R/qtl: QTL mapping in experimental crossesHd1 Allele Types and Their Associations with Major Agronomic Traits in Korean Rice CultivarsAlternative splicing provides a proactive mechanism for the diurnal CONSTANS dynamics in Arabidopsis photoperiodic floweringSplice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence informationMapChart: Software for the Graphical Presentation of Linkage Maps and QTLsHd3a, a Rice Ortholog of the Arabidopsis FT Gene, Promotes Transition to Flowering Downstream of Hd1 under Short-Day ConditionsPhytochrome gene expression and phylogenetic analysis in the short‐day plant <i>Pharbitis nil</i> (Convolvulaceae): Differential regulation by light and an endogenous clockGenetic control of flowering time in rice: integration of Mendelian genetics and genomicsConstitutive expression of the GIGANTEA Ortholog Affects Circadian Rhythms and Suppresses One-shot Induction of Flowering in Pharbitis nil, a Typical Short-day PlantClustal W and Clustal X version 2.0Variation in Arabidopsis flowering time associated with cis-regulatory variation in CONSTANSGenotyping of Single-Nucleotide Polymorphisms by High-Resolution Melting of Small AmpliconsA putative tropical American plant,Ipomoea nil (Convolvulaceae), in pre-Columbian Japanese artHd3a Protein Is a Mobile Flowering Signal in RiceA Circadian Rhythm Set by Dusk Determines the Expression of <i>FT</i> Homologs and the Short-Day Photoperiodic Flowering Response in PharbitisA Distal <i>CCAAT</i> /NUCLEAR FACTOR Y Complex Promotes Chromatin Looping at the <i>FLOWERING LOCUS T</i> Promoter and Regulates the Timing of Flowering in <i>Arabidopsis</i>Two conserved sequence blocks within eukaryotic tRNA genes are major promoter elementsAssembly, Gene Annotation and Marker Development Using 454 Floral Transcriptome Sequences in Ziziphus Celata (Rhamnaceae), a Highly Endangered, Florida Endemic PlantThe genetic basis of flowering responses to seasonal cuesThe CONSTANS gene of arabidopsis promotes flowering and encodes a protein showing similarities to zinc finger transcription factorsPrimer3 on the WWW for General Users and for Biologist ProgrammersRetrotransposons as regulators of gene expressionQTL IciMapping: Integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populationsAdaptation of photoperiodic control pathways produces short-day flowering in ricePhytochrome mediates the external light signal to repress <i>FT</i> orthologs in photoperiodic flowering of riceIsolation of a <i>CONSTANS</i> Ortholog from <i>Pharbitis nil</i> and Its Role in FloweringDevelopment of a routine procedure for single nucleotide polymorphism marker design based on the Tm-shift genotyping methodA Stowaway transposon disrupts the InWDR1 gene controlling flower and seed coloration in a medicinal cultivar of the Japanese morning gloryDevelopment of EST-SSR markers of Ipomoea nilSwitching genetic effects of the flowering time gene Hd1 in LD conditions by Ghd7 and OsPRR37 in rice
- 連携機関・データベース
- 国立情報学研究所 : CiNii Research
- 提供元機関・データベース
- Japan Link Center雑誌記事索引データベースCrossref
- 書誌ID（NDLBibID）
- 034474421