文書・図像類

Transcriptomic analysis of Antarctic toothfish spleen RNA by next generation sequencer

文書・図像類を表すアイコン

Transcriptomic analysis of Antarctic toothfish spleen RNA by next generation sequencer

資料種別
文書・図像類
著者
大田, 竜也ほか
出版者
-
出版年
2010-11-30
資料形態
デジタル
ページ数・大きさ等
-
NDC
-
すべて見る

資料に関する注記

一般注記:

Notothenioid fish, the dominant species in the Southern Ocean, is one of the most intriguing group of species from evolutionary viewpoint. One major r...

書店で探す

全国の図書館の所蔵

国立国会図書館以外の全国の図書館の所蔵状況を表示します。

所蔵のある図書館から取寄せることが可能かなど、資料の利用方法は、ご自身が利用されるお近くの図書館へご相談ください

その他

  • 国立極地研究所学術情報リポジトリ

    デジタル
    連携先のサイトで、学術機関リポジトリデータベース(IRDB)(機関リポジトリ)が連携している機関・データベースの所蔵状況を確認できます。

書誌情報

この資料の詳細や典拠(同じ主題の資料を指すキーワード、著者名)等を確認できます。

デジタル

資料種別
文書・図像類
著者・編者
大田, 竜也
Ota, Tatsuya
出版年月日等
2010-11-30
出版年(W3CDTF)
2010-11-30
並列タイトル等
次世代シークエンサーによるライギョダマシ脾臓RNAのトランスクリプトーム解析
本文の言語コード
eng
対象利用者
一般
一般注記
Notothenioid fish, the dominant species in the Southern Ocean, is one of the most intriguing group of species from evolutionary viewpoint. One major reason of their evolutionary success is the acquisition of anti-freeze glycopeptides (AFGP) by the modification of trypsinogen, which enables them to survive even under harsh environment of the Southern Ocean where temperature can become as low as about -2℃. Another peculiar example of adaptive evolution is nonfunctionalization of hemoglobin genes in icefish. Although loss of hemoglobin is generally lethal for vertebrates, extensive modification of cardiovascular system in icefish has compensated such disadvantage with ensuring sufficient oxygen transport. Recent studies of mitochondrial genes, furthermore, have shown that the evolutionary rates of genes involved in cellular respiration are much higher compared with other teleosts (see also Nagata and Ota in this symposium). In order to shed light on the molecular evolution of notothenioid genes in larger scale, we are currently investigating the genes expressed in Antarctic toothfish (Dissostichus mawsoni) spleen, one of important tissue of hematopoiesis, with taking advantage of technological progress of next generation sequencer. So far 55180 nucleotide sequences were assembled from about 11 million 50-mers by using velvet program (table 1). Subsequent analysis of assembled sequences then revealed that genes highly expressed are those involved in protein synthesis and folding, protein degradation, cellular respiration, cellular movement, innate and adaptive immunity, oxygen transport, iron ion storage and homeostasis, and protection against freezing, as shown in table 2. In the presentation, I am going to further discuss the results obtained in detail from molecular evolutionary perspectives.
第32回極域生物シンポジウム11月30日(火) 国語研究所 2階講堂