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Insight into the symbiotic lifestyle of DPANN archaea revealed by cultivation and genome analyses
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Insight into the symbiotic lifestyle of DPANN archaea revealed by cultivation and genome analyses
- 資料種別
- 記事
- 著者
- Hiroyuki D. Sakaiほか
- 出版者
- Proceedings of the National Academy of Sciences
- 出版年
- 2022-01-12
- 資料形態
- デジタル
- 掲載誌名
- Proceedings of the National Academy of Sciences 119 3
- 掲載ページ
- -
資料詳細
要約等：
- <jats:title>Significance</jats:title><jats:p>The DPANN superphylum is a grouping of symbiotic microorganisms categorized based on their genomic conten...
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デジタル
- 資料種別
- 記事
- タイトル
- 著者標目
- 出版年月日等
- 2022-01-12
- 出版年（W3CDTF）
- 2022-01-12
- タイトル（掲載誌）
- Proceedings of the National Academy of Sciences
- 巻号年月日等（掲載誌）
- 119 3
- 掲載巻
- 119
- 掲載号
- 3
- 掲載年月日（W3CDTF）
- 2022-01-12
- ISSN（掲載誌）
- 00278424
- 出版事項（掲載誌）
- Proceedings of the National Academy of Sciences
- 件名標目
- 対象利用者
- 一般
- 標準番号（その他）
- PMID : 35022241
- DOI
- 10.1073/pnas.2115449119
- 作成日（W3CDTF）
- 2022-01-12
- 著作権情報
- https://creativecommons.org/licenses/by-nc-nd/4.0/
- 関連情報（URI）
- 参照
- Cell surface architecture of the cultivated DPANN archaeon <i>Nanobdella aerobiophila</i>Nanobdella aerobiophila gen. nov., sp. nov., a thermoacidophilic, obligate ectosymbiotic archaeon, and proposal of Nanobdellaceae fam. nov., Nanobdellales ord. nov. and Nanobdellia class. nov.Microbiological insights into anaerobic phenol degradation mechanisms and bulking phenomenon in a mesophilic upflow anaerobic sludge blanket reactor in long-term operationGenome-resolved meta-omics unveils rock-hosted lifestyle of enigmatic DPANN archaeaDomain-level Identification of Single Prokaryotic Cells by Optical Photothermal Infrared Spectroscopy陸上温泉に潜む難培養性・好熱性アーキアの探索
- 参照
- HMMER web server: interactive sequence similarity searchingKEGG: Kyoto Encyclopedia of Genes and GenomesPrimer3—new capabilities and interfacesNovel primers for 16S rRNA-based archaeal community analyses in environmental samplesMultiple self-splicing introns in the 16S rRNA genes of giant sulfur bacteriaInternational Code of Nomenclature of ProkaryotesSnapShot: Class 1 CRISPR-Cas SystemsA new symbiotic nanoarchaeote (Candidatus Nanoclepta minutus) and its host (Zestosphaera tikiterensis gen. nov., sp. nov.) from a New Zealand hot springInsights into the metabolism, lifestyle and putative evolutionary history of the novel archaeal phylum ‘Diapherotrites’Comparative Genomics Provides Insights into the Genetic Diversity and Evolution of the DPANN SuperphylumMetabolic Diversity and Evolutionary History of the Archaeal Phylum “ <i>Candidatus</i> Micrarchaeota” Uncovered from a Freshwater Lake MetagenomeDFAST: a flexible prokaryotic genome annotation pipeline for faster genome publicationGTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy DatabaseA new phylum of Archaea represented by a nanosized hyperthermophilic symbiontMajor New Microbial Groups Expand Diversity and Alter our Understanding of the Tree of LifeCulture Independent Genomic Comparisons Reveal Environmental Adaptations for AltiarchaealesArchaeal extracellular vesicles are produced in an ESCRT-dependent manner and promote gene transfer and nutrient cycling in extreme environmentsUnexpected host dependency of Antarctic NanohaloarchaeotaSnapShot: Class 2 CRISPR-Cas SystemsCharacterisation of a stable laboratory co-culture of acidophilic nanoorganismsProkka: rapid prokaryotic genome annotationMUSCLE: multiple sequence alignment with high accuracy and high throughputMetabolic versatility of small archaea Micrarchaeota and ParvarchaeotaSulfurisphaera ohwakuensis gen. nov., sp. nov., a novel extremely thermophilic acidophile of the order SulfolobalesThe MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER databaseDesign and performance of rRNA targeted oligonucleotide probes for in situ detection and phylogenetic identification of microorganisms inhabiting acid mine drainage environmentsModified mevalonate pathway of the archaeon <i>Aeropyrum pernix</i> proceeds via <i>trans</i> -anhydromevalonate 5-phosphateInsights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal groupPrimer-BLAST: A tool to design target-specific primers for polymerase chain reactionCircos: An information aesthetic for comparative genomicseggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequencesThe distribution, diversity, and importance of 16S rRNA gene introns in the order ThermoprotealesLife on the edge: functional genomic response of <i>Ignicoccus hospitalis</i> to the presence of <i>Nanoarchaeum equitans</i>New CRISPR–Cas systems from uncultivated microbesPSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotesS-layer and cytoplasmic membrane – exceptions from the typical archaeal cell wall with a focus on double membranesUncultivated microbes in need of their own taxonomyInsights into the phylogeny and coding potential of microbial dark matter<i>Nanoarchaeum equitans</i>and<i>Ignicoccus hospitalis</i>: New Insights into a Unique, Intimate Association of Two ArchaeaThe RAST Server: Rapid Annotations using Subsystems TechnologyA standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of lifeSulfolobus hakonensis sp. nov., a Novel Species of Acidothermophilic ArchaeonExploration and isolation of novel thermophiles in frozen enrichment cultures derived from a terrestrial acidic hot springA hot story from comparative genomics: reverse gyrase is the only hyperthermophile-specific proteinThe Sulfolobus-?Caldariella? group: Taxonomy on the basis of the structure of DNA-dependent RNA polymerasesARB: a software environment for sequence dataThe Archaellum: An Update on the Unique Archaeal Motility StructureA chemoautotrophic and thermophilic microorganism isolated from an acid hot springMetallosphaera sedula gen, and sp. nov. Represents a New Genus of Aerobic, Metal-Mobilizing, Thermoacidophilic ArchaebacteriaGenomics-informed isolation and characterization of a symbiotic Nanoarchaeota system from a terrestrial geothermal environmentEnigmatic, ultrasmall, uncultivated ArchaeaA 3-Hydroxypropionate/4-Hydroxybutyrate Autotrophic Carbon Dioxide Assimilation Pathway in ArchaeaLineages of Acidophilic Archaea Revealed by Community Genomic AnalysisAcidianus infernus gen. nov., sp. nov., and Acidianus brierleyi Comb. nov.: Facultatively Aerobic, Extremely Acidophilic Thermophilic Sulfur-Metabolizing ArchaebacteriaThe Vienna RNA WebsuiteGenomic diversity, lifestyles and evolutionary origins of DPANN archaeaA Complex Endomembrane System in the Archaeon Ignicoccus hospitalis Tapped by Nanoarchaeum equitans‘ARMAN’ archaea depend on association with euryarchaeal host in culture and in situThree-dimensional analysis of the structure and ecology of a novel, ultra-small archaeonUnicycler: Resolving bacterial genome assemblies from short and long sequencing readstrimAl: a tool for automated alignment trimming in large-scale phylogenetic analysesR2DT is a framework for predicting and visualising RNA secondary structure using templatesEmendation of rules 5b, 8, 15 and 22 of the International Code of Nomenclature of Prokaryotes to include the rank of phylum
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- 国立情報学研究所 : CiNii Research
- 提供元機関・データベース
- Crossref科学研究費助成事業データベース科学研究費助成事業データベースCrossrefCrossrefCrossrefCrossrefCrossrefCrossref